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Repository containing code to link binary_c and python

Experimental viewer and plotter for binary_c's ensemble JSON data

a smaller and cleaner version for container-registry.surrey.ac.uk/shared-containers/bioinformatics-miniconda-r441-seurat5, but it uses R 4.3.3

a smaller and cleaner version for container-registry.surrey.ac.uk/shared-containers/bioinformatics-miniconda-r441-seurat5

this image comes with BITFAM and RStan

Please refer to the tutorial Transcription factor regulatory activity in single cell transcriptomics on YouTube. ]

https://www.bioconductor.org/packages/release/bioc/html/Banksy.html This container is specifically for Banksy, Spatial transcriptomic clustering.

A template for creating Docker image file projects. Includes an example Dockerfile and the required gitlab-ci.yml to build the image.

Seurat5 base + SingleCellExperiment

A container for building the YingMa0107/CARD tool in R for "Spatially Informed Cell Type Deconvolution for Spatial Transcriptomics".

use podman run -it container-registry.surrey.ac.uk/shared-containers/bioinformatics-yma-card