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HaMeR: Reconstructing Hands in 3D with Transformers

Docker for runnning HaMeR 3D Hand

A template for creating Docker image file projects. Includes an example Dockerfile and the required gitlab-ci.yml to build the image.

pytorch2, ffcv, mmcv

Seurat5 base + SingleCellExperiment

a self-hosted virtual browser by https://github.com/m1k1o/neko

a self-hosted virtual browser by https://github.com/m1k1o/neko

A template for creating Docker image file projects. Includes an example Dockerfile and the required gitlab-ci.yml to build the image.

this image comes with BITFAM and RStan

Please refer to the tutorial Transcription factor regulatory activity in single cell transcriptomics on YouTube. ]

A template for creating Docker image file projects. Includes an example Dockerfile and the required gitlab-ci.yml to build the image.

https://www.bioconductor.org/packages/release/bioc/html/Banksy.html This container is specifically for Banksy, Spatial transcriptomic clustering.

a smaller and cleaner version for container-registry.surrey.ac.uk/shared-containers/bioinformatics-miniconda-r441-seurat5, but it uses R 4.3.3

a smaller and cleaner version for container-registry.surrey.ac.uk/shared-containers/bioinformatics-miniconda-r441-seurat5

A container for building the YingMa0107/CARD tool in R for "Spatially Informed Cell Type Deconvolution for Spatial Transcriptomics".

use podman run -it container-registry.surrey.ac.uk/shared-containers/bioinformatics-yma-card

A template for creating Docker image file projects. Includes an example Dockerfile and the required gitlab-ci.yml to build the image.

Contains dependencies for https://github.com/YuliangXiu/ECON/blob/master/docs/installation-ubuntu.md

Jupyter lab to debug python code running in a docker!

This is a customer docker including python pytorch with cuda build based on ubuntu 22.04.