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Created with Raphaël 2.2.029Dec151197130Nov2928272422212019181615141312109876532131Oct252322211918171615141312111098730Sep2625221915131210987429Aug252120191813121110987642131Jul3029282726252423222120191815141312111098765432130Jun29282726252322212019181716151412119876543131May302928working on the docstringchanging the documentationcreated pre-merge branchadded the setup.pymerged the HPC branch. going over all the pylint errors, this will take some time. need to change alot of thingsadd functions to dicts and ensemble to convert from wide to narrow dicts, and other prep for making plotsfeature/HPCfeature/HPCadd functions to dicts to handle 2D dicts:removed double lineallow options to be passed to the IMFforce () on memoize callrevert previous changeadd M1 dist optionremoved all the deepcopy calls. They slow things down, alot. and I think they are not necessaryremoved the verbose sampling outputstill issues with the decorators...add nfspath function (not working yet)add function to determine the cache directory (if available) and improved the disk cache handlingfix newline typoimprove newline passingclean up of code, add option to customize the newlines at the end of log linesforce file.open to use textmode unless binary is specifiednot surefix typos in new dataIO open()clean up open() functions to use self.auto() which does compression for us based on the file extensiona few cleanups and attempts to paraellelize loops (that failed)added option for dry_run_hooksync latest changes to HPC/condorfix cmdline parsing of bool typesmore attempts to clean up the code to work better on NFS : seems ok now, but expect more "bug" fixes to come (and more cleanup as the code is a bit hacky)backported more changes from the working HPC/condor machinebackport changes to use locked_close() etc.add multiplictity to the const_dt function : no idea how it worked previously!remove curses from cache tests, just output to stdoutfix commentadd automatic cacheing of various functions, and a cache_test() routine to test the runtimes with and without cachingadd custon self.locked_open function to lock and uniquely open filesadded NFS file locking with flufl.lock()fix typos in the grid defaultsadd descriptions for the HPC varsmake sure all the condor/slurm variable descriptions have types