removed two of the backup makefiles, changed setup to work with the dirs correctly

Makefile

@@ -45,11 +45,12 @@ SO_FLAGS 			:= -shared
 PY_EXEC 			:= python3
 PY_SETUP 			:= setup.py
 PY_OPTIONS 			:= build_ext --inplace
+# maybe pass argument from here to the setup.py?
 
 all:
 	$(CC) -DBINARY_C=$(BINARY_C) $(CFLAGS) $(INCDIRS) $(C_SRC) -o $(OBJECTS) $(OBJ_FLAGS) $(LIBS) 
 	$(CC) -DBINARY_C=$(BINARY_C) $(SO_FLAGS) -o $(SO_NAME) $(OBJECTS)
-# 	$(PY_EXEC) $(PY_SETUP) $(PY_OPTIONS) 
+	$(PY_EXEC) $(PY_SETUP) $(PY_OPTIONS) 
 
 test:	
 	@echo OBJECTS: $(OBJECTS)
@@ -60,4 +61,5 @@ test:
 
 clean:
 	$(RM) $(OBJ_DIR)/*.o $(TARGET_LIB_DIR)/*.so
+	$(RM) *.so
 	$(RM) -r build/
\ No newline at end of file

new_makefile.make

-# Makefile for Rapid Binary Star Evolution program
-
-# you will need to set the BINARY_C variable to point
-# to the root binary_c directory
-
-# https://stackoverflow.com/questions/30573481/path-include-and-src-directory-makefile/30602701#30602701
-ifeq ($(BINARY_C),)
-  $(error BINARY_C is not set)
-endif
-
-SRC_DIR := src
-OBJ_DIR := obj
-INC_DIR := inc 
-BIN_DIR := bin 
-TARGET_LIB_DIR := lib
-
-SRC_FILES := $(wildcard $(SRC_DIR)/binary_c_python_api.c)
-OBJ_FILES := $(patsubst $(SRC_DIR)/%.c,$(OBJ_DIR)/%.o,$(SRC_FILES))
-DEP_FILES := $(patsubst $(SRC_DIR)/%.c,$(OBJ_DIR)/%.d,$(SRC_FILES))
-
-# https://latedev.wordpress.com/2014/12/02/generic-makefiles-with-gcc-and-gnu-make-part-2
-
-# SRC = $(wildcard $(SRC_DIR)/binary_c_python_api.c)
-# OBJECTS = $(C_SRC:$(SRC_DIR)/%.c=$(OBJ_DIR)/%.o)
-
-
-# 
-
-CC      := gcc
-LD      := gcc
-MAKE    := /usr/bin/make
-
-PROGRAM := binary_c_python_api
-
-LIBS 	:= -lbinary_c $(shell $(BINARY_C)/binary_c-config --libs)
-
-# C_SRC   := src/binary_c_python_api.c
-C_SRC = $(wildcard $(SRC_DIR)/binary_c_python_api.c)
-CFLAGS := -fPIC $(shell $(BINARY_C)/binary_c-config --flags | sed s/-fvisibility=hidden// ) -I$(BINARY_C)/src/ -I$(BINARY_C)/src/API -Iinclude
-
-OBJECTS := $(C_SRC:.c=.o)
-OBJ_FLAGS := -c
-
-SO_FLAGS := -shared -o
-SO_NAME := libbinary_c_api.so
-
-# To create python shared library
-PY_EXEC := python3
-PY_SETUP := setup.py
-PY_OPTIONS := build_ext --inplace
-
-# rules
-.PHONY: all clean
-
-# all: $(PROGRAM)
-all: $(OBJECTS)
-	$(CC) -DBINARY_C=$(BINARY_C) $(CFLAGS) $(INCDIRS) $(C_SRC) $(OBJ_FLAGS) $(INCDIRS) $(LIBS)
-
-	# Make shared lib
-	$(CC) -DBINARY_C=$(BINARY_C) $(SO_FLAGS) $(SO_NAME) $(OBJECTS)
-	$(PY_EXEC) $(PY_SETUP) $(PY_OPTIONS) 
-
-clean:
-	$(RM) *.o *.so
-	$(RM) build/

old_makefile.make

-# Makefile for Rapid Binary Star Evolution program
-
-# you will need to set the BINARY_C variable to point
-# to the root binary_c directory
-ifeq ($(BINARY_C),)
-  $(error BINARY_C is not set)
-endif
-
-
-CC      := gcc
-LD      := gcc
-PROGRAM := binary_c_python_api
-MAKE    := /usr/bin/make
-LIBS    := -lbinary_c $(shell $(BINARY_C)/binary_c-config --libs)
-#`$(BINARY_C)/binary_c-config --libdirs_list` 
-C_SRC   := binary_c_python_api.c
-OBJECTS := $(C_SRC:.c=.o)
-OBJ_FLAGS := -c
-CFLAGS := -fPIC $(shell $(BINARY_C)/binary_c-config --flags | sed s/-fvisibility=hidden// ) -I$(BINARY_C)/src/ -I$(BINARY_C)/src/API 
-SO_FLAGS := -shared -o
-SO_NAME := libbinary_c_api.so
-
-# To create python shared library
-PY_EXEC := python3
-PY_SETUP := setup.py
-PY_OPTIONS := build_ext --inplace
-
-all: $(OBJECTS)
-        $(CC) -DBINARY_C=$(BINARY_C) $(CFLAGS) $(INCDIRS) $(C_SRC) $(OBJ_FLAGS) $(INCDIRS) $(LIBS) 
-        $(CC) -DBINARY_C=$(BINARY_C) $(SO_FLAGS) $(SO_NAME) $(OBJECTS)
-        $(PY_EXEC) $(PY_SETUP) $(PY_OPTIONS) 
-
-clean:
-        rm -f *.o *.so
-        rm -rf build/
-

setup.py

@@ -4,8 +4,10 @@ import subprocess
 import re
 import sys
 
-# binary_c must be installed.
+# TODO: write code to know exact parent directory of this file.
+CWD = os.getcwd()
 
+# binary_c must be installed.
 binary_c_config = os.environ["BINARY_C"] + "/binary_c-config"
 
 binary_c_incdirs = (
@@ -62,17 +64,18 @@ setup(
     ext_modules=[
         Extension(
             "binary_c",
-            ["binary_c_python.c"],
-            libraries=["binary_c"] + binary_c_libs + ["binary_c_api"],
+            ["src/binary_c_python.c"],
             include_dirs=[
                 os.environ["BINARY_C"] + "/src",
                 os.environ["BINARY_C"] + "/src/API",
                 'include',
-            ]
-            + binary_c_incdirs,
-            library_dirs=[os.environ["BINARY_C"] + "/src", "./"] + binary_c_libdirs,
-            runtime_library_dirs=[os.environ["BINARY_C"] + "/src", "./"]
-            + binary_c_libdirs,
+            ] + binary_c_incdirs,
+            libraries=
+                ["binary_c"] + binary_c_libs + ["binary_c_api"],
+            library_dirs=
+                [os.environ["BINARY_C"] + "/src", "./", os.path.join(CWD,'lib/')] + binary_c_libdirs,
+            runtime_library_dirs=
+                [os.environ["BINARY_C"] + "/src", "./", os.path.join(CWD,'lib/')] + binary_c_libdirs,
             define_macros=[] + binary_c_define_macros,
             extra_objects=[],
             extra_compile_args=[],