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Apptainer for https://gitlab.surrey.ac.uk/surrey-shared-containers/bioinformatics-r-seurat5-with-recommended-pkgs

This project contains all code used in producing the results mentioned in the Year 3 Project Report.

Apptainer for https://gitlab.surrey.ac.uk/surrey-shared-containers/bioinformatics-r-seurat-5-with-banksy

https://www.bioconductor.org/packages/release/bioc/html/Banksy.html This container is specifically for Banksy, Spatial transcriptomic clustering.

A container for building the YingMa0107/CARD tool in R for "Spatially Informed Cell Type Deconvolution for Spatial Transcriptomics".

use podman run -it container-registry.surrey.ac.uk/shared-containers/bioinformatics-yma-card

a smaller and cleaner version for container-registry.surrey.ac.uk/shared-containers/bioinformatics-miniconda-r441-seurat5

Contains dependencies for https://github.com/YuliangXiu/ECON/blob/master/docs/installation-ubuntu.md

HDR Illumination Estimation from a single LDR limited FOV image. Utilising outpainting, DNN and GAN techniques.