From f0cbdbc57a975813f998ecf4ee1b38a20b56498c Mon Sep 17 00:00:00 2001
From: "Dutta, Ayushi (PG/R - Comp Sci & Elec Eng)" <ayushi.dutta@surrey.ac.uk>
Date: Mon, 7 Apr 2025 13:41:40 +0000
Subject: [PATCH] init
---
container.def | 33 +++++++++++++++++++++++----------
1 file changed, 23 insertions(+), 10 deletions(-)
diff --git a/container.def b/container.def
index 204172c..2b408e6 100644
--- a/container.def
+++ b/container.def
@@ -5,19 +5,32 @@ From: nvidia/cuda:11.8.0-cudnn8-runtime-ubuntu22.04
%post
# Install special software or additions
apt-get update -y # Good practice, update the package database.
- apt-get install -y libopenblas-dev # Install the BLAS.
- apt-get autoremove -y && apt-get autoclean -y # Good practice, to keep the Docker image as small as possible.
+ apt-get install -y \
+ wget curl vim bzip2 git build-essential \
+ libopenblas-dev
+ apt-get autoremove -y && apt-get clean && rm -rf /var/lib/apt/lists/* # keep the Docker image as small as possible.
+
+ # Install Miniconda
+ wget https://repo.anaconda.com/miniconda/Miniconda3-latest-Linux-x86_64.sh -O miniconda.sh
+ bash miniconda.sh -b -p /opt/conda
+ rm miniconda.sh
+ export PATH=/opt/conda/bin:$PATH
+ source /opt/conda/etc/profile.d/conda.sh
+ conda init bash
+
+ # Conda environment
+ git clone https://github.com/snuvclab/gala.git
+ cd gala
+ conda env create -f env.yaml
+ conda clean -afy
+ cd ..
+ rm -rf gala
%environment
# Set some environment vars
- export PATH=/opt/root/bin:$PATH
- export LD_LIBRARY_PATH=/opt/root/lib:$LD_LIBRARY_PATH
- export PYTHONPATH=/opt/root/lib
-
-
-%runscript
- # The command that will run when container is started via apptainer run command.
- python /opt/root/tutorials/roofit/rf101_basics.py
+ export PATH=/opt/conda/bin:$PATH
+ source /opt/conda/etc/profile.d/conda.sh
+ conda activate gala
%labels
# Add custom metadata to the container.
--
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