diff --git a/Figures/Figure4A_4G_Suppl_Figure5-9and12-17_Power_ON_OFF_allsub_topo_boxplots.m b/Figures/Figure4A_4G_Suppl_Figure5-9and13-18_Power_ON_OFF_allsub_topo_boxplots.m similarity index 100% rename from Figures/Figure4A_4G_Suppl_Figure5-9and12-17_Power_ON_OFF_allsub_topo_boxplots.m rename to Figures/Figure4A_4G_Suppl_Figure5-9and13-18_Power_ON_OFF_allsub_topo_boxplots.m diff --git a/Figures/Figure4D_4J_Suppl_Figure10and18_Frequency_ON_OFF_allsub_topo.m b/Figures/Figure4D_4J_Suppl_Figure11and19_Frequency_ON_OFF_allsub_topo.m similarity index 100% rename from Figures/Figure4D_4J_Suppl_Figure10and18_Frequency_ON_OFF_allsub_topo.m rename to Figures/Figure4D_4J_Suppl_Figure11and19_Frequency_ON_OFF_allsub_topo.m diff --git a/Figures/Suppl_Figure3_2_ERPs_phase_reset_nm_alpha.m b/Figures/Rev_Suppl_Figure3_2_ERPs_phase_reset_nm_alpha.m similarity index 100% rename from Figures/Suppl_Figure3_2_ERPs_phase_reset_nm_alpha.m rename to Figures/Rev_Suppl_Figure3_2_ERPs_phase_reset_nm_alpha.m diff --git a/Figures/Suppl_Figure3_2_ERPs_phase_reset_nm_theta.m b/Figures/Rev_Suppl_Figure3_2_ERPs_phase_reset_nm_theta.m similarity index 100% rename from Figures/Suppl_Figure3_2_ERPs_phase_reset_nm_theta.m rename to Figures/Rev_Suppl_Figure3_2_ERPs_phase_reset_nm_theta.m diff --git a/analyses/psd/E_TF_Power_ON_OFF_change_psd_phasictonic_alpha.m b/Figures/Suppl_Figure10_TF_Power_ON_OFF_change_psd_phasictonic_alpha.m similarity index 100% rename from analyses/psd/E_TF_Power_ON_OFF_change_psd_phasictonic_alpha.m rename to Figures/Suppl_Figure10_TF_Power_ON_OFF_change_psd_phasictonic_alpha.m diff --git a/analyses/psd/E_TF_Power_ON_OFF_change_psd_phasictonic_theta.m b/Figures/Suppl_Figure10_TF_Power_ON_OFF_change_psd_phasictonic_theta.m similarity index 100% rename from analyses/psd/E_TF_Power_ON_OFF_change_psd_phasictonic_theta.m rename to Figures/Suppl_Figure10_TF_Power_ON_OFF_change_psd_phasictonic_theta.m diff --git a/Figures/Suppl_Figure11_19_connectivity.m b/Figures/Suppl_Figure12_20_connectivity.m similarity index 100% rename from Figures/Suppl_Figure11_19_connectivity.m rename to Figures/Suppl_Figure12_20_connectivity.m diff --git a/README.md b/README.md index 8b7a557b5bd20965f99c465ab481a0728fda5ecd..79a57e3c153bb03af46a11b441121d3a388c9f46 100644 --- a/README.md +++ b/README.md @@ -149,13 +149,19 @@ make figures, run after analyses **Figure3C_3H_eBOSC_frequency_corr_nwaves**: plot correlation scatter plot between individual oscillation peak frequency and peak stimulation frequency **Figure3D_3I_polarhistogram**: plot polar histogram of mean phase and resultant across participants **Figure3E_3J_resultant_topo**: plot resultant for each electrode across scalp, test non-uniformity across circle -**Figure4A_4G_Suppl_Figure5-9and12-17_Power_ON_OFF_allsub_topo_boxplots**: plot topography of power change lme F-values and significant electrode clusters +**Figure4A_4G_Suppl_Figure5-9and13-18_Power_ON_OFF_allsub_topo_boxplots**: plot topography of power change lme F-values and significant electrode clusters **Figure4B_4C_Power_ON_OFF_change_psd_phasictonic_alpha**: plot power changes across spectrum for alpha CLAS -**Figure4D_4J_Suppl_Figure10and18_Frequency_ON_OFF_allsub_topo**: plot topography of frequency change lme F-values and significant electrode clusters +**Figure4D_4J_Suppl_Figure11and19_Frequency_ON_OFF_allsub_topo**: plot topography of frequency change lme F-values and significant electrode clusters **Figure4E-F_4K-L_Frequency_ON_OFF_change_boxplots_time**: make boxplots for frequency change and plot frequency change over time across different conditions -**Figure4H_4I_Power_ON_OFF_change_psd_phasictonic_theta**: plot power changes across spectrum for theta CLAS -**Suppl_Figure3_ISI_autocorr**: plot autocorrelation across ISI's -**Suppl_Figure11_19_connectivity**: plot topography of connectivity change lme F-values and significant electrode clusters, plot significant connections and boxplots for different conditions +**Figure4H_4I_Power_ON_OFF_change_psd_phasictonic_theta**: plot power changes across spectrum for theta CLAS +**Rev_Suppl_Figure3_2_ERPs_phase_reset_nm_alpha**: for reviewer (not included in manuscript), plot ERP across all stimuli of alpha CLAS +**Rev_Suppl_Figure3_2_ERPs_phase_reset_nm_theta**: for reviewer (not included in manuscript), plot ERP across all stimuli of theta CLAS +**Suppl_Figure3_ISI_autocorr**: plot autocorrelation across ISI's +**Suppl_Figure10_TF_Power_ON_OFF_change_psd_phasictonic_alpha**: Time-frequency plot of power changes across OFF-ON-OFF windows for alpha CLAS +**Suppl_Figure10_TF_Power_ON_OFF_change_psd_phasictonic_theta**: Time-frequency plot of power changes across OFF-ON-OFF windows for theta CLAS +**Suppl_Figure12_20_connectivity**: plot topography of connectivity change lme F-values and significant electrode clusters, plot significant connections and boxplots for different conditions +**Suppl_Figure21_ERPs_phase_reset_alpha**: plots for phase-reset analysis (alpha-filtered), plot ERPs and phases from AEP block for stimuli delivered at orthogonal phases, calculate phase-reset and evaluate amplitude-dependency +**Suppl_Figure22_ERPs_phase_reset_theta**: plots for phase-reset analysis (theta-filtered), plot ERPs and phases from AEP block for stimuli delivered at orthogonal phases, calculate phase-reset and evaluate amplitude-dependency **Suppl_Table1_questionnaires**: make table for KSS and VAMS changes from evening to morning