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-Paper_data_extraction_from_MEDMI.R:
-    The code extracts the environmental variable provided by the MetOffice
-    
-Paper_Campylobacter_correction.R:
-The code correct the Campylobacter data, to remove the incubation period and reporting delay. Incubation period based on log-normal, which is better. 
-This is not the best way to remove reporting delay as it depends on time, season etc.  Contacted Nouflay but no reply. So I cannot be bother to do this. Use simple Sartwell instead. 
-
-PAPER_campy_correction_plot: The code associates the value of the environmental variables to the Campylobacter cases at the location (diagnostic postcode) and date of occurrence with a chosen time-lag
-
-PAPER_Conditional_Probability.R: To find the conditional probability
-
-PAPER_Reconstruction_from_Conditional_probability_light_hum_max (and  all other variables): To reconstruct the time-series
-
-PAPER_Plots_Campylobacter_Conditional_probability_quantile.r. PAPER_Reconstruction_from_Conditional_probability_light_hum_max_quantile.r  paper_plot_Simulated_Reconstruct_3_var_quantile.R
-The sameas above with quantiles
+See information in document "Content of Codes used in Campylobacter project.pdf"
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